Transcript: ENST00000458625.1 CCL25-002

Description

chemokine (C-C motif) ligand 25 [Source:HGNC Symbol;Acc:10624]

Gene Synonyms

Ckb15, SCYA25, TECK

Location

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 5181 variant alleles and maps to 266 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000390669.3	CCL25-003	924	150aa	ENSP00000375086.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12194	O15444	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000253451.4	CCL25-001	953	149aa	ENSP00000253451.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56080	O15444	NM_005624.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000315626.4	CCL25-201	361	84aa	ENSP00000324756.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JDZ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458625.1	CCL25-002	744	84aa	ENSP00000401882.1	Nonsense mediated decay		C9JDZ7	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 744 bps, Translation length: 84 residues

Version

ENST00000458625.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000280521 (version 2)