Transcript: ENST00000470307.2 PRKAG3-003

Description

protein kinase, AMP-activated, gamma 3 non-catalytic subunit [Source:HGNC Symbol;Acc:9387]

Gene Synonyms

AMPKG3

Location

Chromosome 2: 219,689,086-219,696,526 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 9 domains and features, is associated with 3810 variant alleles and maps to 271 oligo probes.

Gene

This transcript is a product of gene ENSG00000115592.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000529249.1	PRKAG3-006	2222	489aa	ENSP00000436068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2424	B4DT70 Q9UGI9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439262.2	PRKAG3-202	2301	464aa	ENSP00000397133.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DT70 Q9UGI9	NM_017431.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545803.1	PRKAG3-203	1784	305aa	ENSP00000444536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DT70	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392098.3	PRKAG3-201	1193	353aa	ENSP00000375947.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DUK8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430489.1	PRKAG3-005	331	100aa	ENSP00000416100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIC7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000233944.3	PRKAG3-001	2326	489aa	ENSP00000233944.3	Nonsense mediated decay	CCDS2424	B4DT70 Q9UGI9	-	-
ENST00000470307.2	PRKAG3-003	1199	353aa	ENSP00000419272.2	Nonsense mediated decay		B4DUK8	-	-
ENST00000490971.1	PRKAG3-002	1619	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 1,199 bps, Translation length: 353 residues

Version

ENST00000470307.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000336554 (version 1)

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Transcript: ENST00000470307.2 PRKAG3-003

Summary