Transcript: ENST00000473334.1 PTP4A1-003

Description

protein tyrosine phosphatase type IVA, member 1 [Source:HGNC Symbol;Acc:9634]

Gene Synonyms

HH72, PRL-1, PRL1, PTP(CAAX1), PTPCAAX1

Location

About this transcript

This transcript has 2 exons, is associated with 1686 variant alleles and maps to 102 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370651.3	PTP4A1-004	5088	173aa	ENSP00000359685.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4965	Q93096	NM_003463.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370650.2	PTP4A1-201	3294	148aa	ENSP00000359684.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5TCM7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000578299.1	PTP4A1-005	135	44aa	ENSP00000462406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSB4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473334.1	PTP4A1-003	638	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470661.1	PTP4A1-002	479	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 638 bps,

Version

ENST00000473334.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000041082 (version 1)