Transcript: ENST00000465287.1 PATZ1-005

Description

POZ (BTB) and AT hook containing zinc finger 1 [Source:HGNC Symbol;Acc:13071]

Gene Synonyms

MAZR, PATZ, RIAZ, ZBTB19, ZNF278, ZSG, dJ400N23

Location

Chromosome 22: 31,736,663-31,739,577 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1424 variant alleles and maps to 194 oligo probes.

Gene

This transcript is a product of gene ENSG00000100105.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000266269.5	PATZ1-001	3781	687aa	ENSP00000266269.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13894	Q9HBE1 Q9HD72	NM_014323.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405309.3	PATZ1-002	3711	537aa	ENSP00000384173.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46691	Q9HBE1 Q9HD72	NM_032052.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000351933.4	PATZ1-004	3638	641aa	ENSP00000337520.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13895	Q9HBE1 Q9HD72	NM_032050.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000215919.3	PATZ1-003	2516	537aa	ENSP00000215919.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13896	Q9HBE1 Q9HD72	NM_032051.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465287.1	PATZ1-005	1702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494109.1	PATZ1-006	835	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,702 bps,

Version

ENST00000465287.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000321936 (version 1)

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Transcript: ENST00000465287.1 PATZ1-005

Summary