Transcript: ENST00000580916.1 MRC2-007

Description

mannose receptor, C type 2 [Source:HGNC Symbol;Acc:16875]

Gene Synonyms

CD280, CLEC13E, ENDO180, KIAA0709, UPARAP

Location

Chromosome 17: 60,766,219-60,767,294 forward strand.

About this transcript

This transcript has 3 exons, is associated with 609 variant alleles and maps to 71 oligo probes.

Gene

This transcript is a product of gene ENSG00000011028.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303375.5	MRC2-001	5988	1479aa	ENSP00000307513.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11634	J3QQZ6 Q9UBG0	NM_006039.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446119.2	MRC2-004	3201	345aa	ENSP00000400445.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EME3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579432.1	MRC2-005	574	35aa	ENSP00000463968.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QQZ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000584682.1	MRC2-006	598	157aa	ENSP00000461968.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580916.1	MRC2-007	210	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000583597.1	MRC2-003	3238	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000584265.1	MRC2-002	2025	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 210 bps,

Version

ENST00000580916.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000445158 (version 1)

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Transcript: ENST00000580916.1 MRC2-007

Summary