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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CASP4 ENSG00000196954

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Description

caspase 4, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1505]

Gene Synonyms

CASP4, ICE(rel)II, ICEREL-II, ICH-2, ICH2, Mih1/TX, TX

Location

Chromosome 11: 104,813,593-104,840,163 reverse strand.

GRCh37:CM000673.1

About this gene

This gene has 13 transcripts (splice variants), 414 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000444739.2	CASP4-001	2158	377aa	ENSP00000388566.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8327	E9PMT1 P49662 Q7KYX7	NM_001225.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000393150.3	CASP4-004	1340	321aa	ENSP00000376857.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41704	P49662 Q7KYX7	NM_033306.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000417440.2	CASP4-007	763	147aa	ENSP00000401673.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PMT1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533252.1	CASP4-013	215	72aa	ENSP00000432879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000531333.1	CASP4-008	667	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529183.1	CASP4-009	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529565.1	CASP4-006	4745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533730.1	CASP4-005	1214	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524843.1	CASP4-002	978	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531546.1	CASP4-003	921	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534356.1	CASP4-010	771	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525116.1	CASP4-011	684	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530309.1	CASP4-012	481	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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