Description
protein tyrosine phosphatase, non-receptor type 20A [Source:HGNC Symbol;Acc:23422]
Gene Synonyms
CT126, PTPN20B, bA142I17.1, bA42B19.1, hPTPN20
Location
Chromosome 10: 46,549,955-46,641,045 reverse strand.
GRCh37:CM000672.1
About this gene
This gene has 32 transcripts (splice variants) and 13 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000374339.3 | PTPN20A-001 | 1388 | 420aa | ENSP00000363459.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31190 | D6RC68 Q4JDL3 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000374218.2 | PTPN20A-201 | 2872 | 339aa | ENSP00000363335.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41507 | Q4JDL3 | NM_001042395.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000437863.1 | PTPN20A-205 | 2870 | 392aa | ENSP00000403444.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q4JDL3 | NM_001042389.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000395721.2 | PTPN20A-007 | 2779 | 339aa | ENSP00000379071.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41507 | Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000374342.2 | PTPN20A-202 | 2539 | 278aa | ENSP00000363462.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 G8JLF9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000374346.3 | PTPN20A-002 | 2481 | 226aa | ENSP00000363466.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31191 | D6RC68 Q4JDL3 Q5T1G4 | NM_001042387.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000395722.3 | PTPN20A-203 | 2323 | 206aa | ENSP00000379072.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000395725.3 | PTPN20A-204 | 2226 | 145aa | ENSP00000379075.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41508 | Q4JDL3 Q5T1G4 | NM_001042396.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000506080.1 | PTPN20A-009 | 1401 | 392aa | ENSP00000421921.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000511769.1 | PTPN20A-006 | 1339 | 411aa | ENSP00000424283.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41506 | Q4JDL3 | NM_001042390.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000505814.1 | PTPN20A-005 | 1244 | 339aa | ENSP00000426355.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41507 | Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000509599.1 | PTPN20A-012 | 945 | 226aa | ENSP00000425012.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31191 | D6RC68 Q4JDL3 Q5T1G4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000513156.1 | PTPN20A-003 | 913 | 269aa | ENSP00000425912.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31189 | Q4JDL3 | NM_001042391.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000502705.1 | PTPN20A-013 | 854 | 206aa | ENSP00000420995.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000513266.1 | PTPN20A-011 | 818 | 197aa | ENSP00000422839.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000395727.2 | PTPN20A-004 | 790 | 228aa | ENSP00000379077.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41505 | Q4JDL3 | NM_001042392.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000509774.1 | PTPN20A-014 | 788 | 217aa | ENSP00000425362.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53531 | Q4JDL3 Q5T1G4 | NM_001042393.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000508602.1 | PTPN20A-015 | 742 | 198aa | ENSP00000424491.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q4JDL3 Q5T1G4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000509900.1 | PTPN20A-008 | 693 | 145aa | ENSP00000423819.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41508 | Q4JDL3 Q5T1G4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000502254.1 | PTPN20A-010 | 599 | 145aa | ENSP00000421404.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 Q4JDK3 Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000417004.1 | PTPN20A-016 | 567 | 126aa | ENSP00000396009.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T1G4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000503851.1 | PTPN20A-018 | 545 | 136aa | ENSP00000427676.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53530 | Q4JDK3 Q4JDL3 | NM_001042394.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000506881.1 | PTPN20A-017 | 457 | 68aa | ENSP00000422384.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000508357.1 | PTPN20A-020 | 1213 | 62aa | ENSP00000426681.1 | Nonsense mediated decay | D6RF36 | - | - | |
| ENST00000510335.1 | PTPN20A-021 | 1153 | 104aa | ENSP00000421453.1 | Nonsense mediated decay | Q4JDL3 | - | - | |
| ENST00000374340.3 | PTPN20A-019 | 3125 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000246887.6 | PTPN20A-022 | 1995 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000509181.1 | PTPN20A-027 | 1929 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000513756.1 | PTPN20A-025 | 640 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000508715.1 | PTPN20A-026 | 586 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000513159.1 | PTPN20A-024 | 450 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000466912.1 | PTPN20A-028 | 446 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
