Description
protein tyrosine phosphatase, non-receptor type 20A [Source:HGNC Symbol;Acc:23422]
Gene Synonyms
CT126, PTPN20B, bA142I17.1, bA42B19.1, hPTPN20
Location
Chromosome 10: 46,551,654-46,640,660 reverse strand.
About this transcript
This transcript has 10 exons, is annotated with 16 domains and features, is associated with 3871 variant alleles and maps to 640 oligo probes.
Gene
This transcript is a product of gene ENSG00000204179.6 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000374218.2 | PTPN20A-201 | 2872 | 339aa | ENSP00000363335.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41507 | Q4JDL3 | NM_001042395.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000437863.1 | PTPN20A-205 | 2870 | 392aa | ENSP00000403444.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q4JDL3 | NM_001042389.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000395721.2 | PTPN20A-007 | 2779 | 339aa | ENSP00000379071.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41507 | Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000374342.2 | PTPN20A-202 | 2539 | 278aa | ENSP00000363462.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 G8JLF9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000374346.3 | PTPN20A-002 | 2481 | 226aa | ENSP00000363466.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31191 | D6RC68 Q4JDL3 Q5T1G4 | NM_001042387.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000395722.3 | PTPN20A-203 | 2323 | 206aa | ENSP00000379072.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000395725.3 | PTPN20A-204 | 2226 | 145aa | ENSP00000379075.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41508 | Q4JDL3 Q5T1G4 | NM_001042396.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000506080.1 | PTPN20A-009 | 1401 | 392aa | ENSP00000421921.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000374339.3 | PTPN20A-001 | 1388 | 420aa | ENSP00000363459.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31190 | D6RC68 Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000511769.1 | PTPN20A-006 | 1339 | 411aa | ENSP00000424283.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41506 | Q4JDL3 | NM_001042390.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000505814.1 | PTPN20A-005 | 1244 | 339aa | ENSP00000426355.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41507 | Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000509599.1 | PTPN20A-012 | 945 | 226aa | ENSP00000425012.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31191 | D6RC68 Q4JDL3 Q5T1G4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000513156.1 | PTPN20A-003 | 913 | 269aa | ENSP00000425912.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS31189 | Q4JDL3 | NM_001042391.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000502705.1 | PTPN20A-013 | 854 | 206aa | ENSP00000420995.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000513266.1 | PTPN20A-011 | 818 | 197aa | ENSP00000422839.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000395727.2 | PTPN20A-004 | 790 | 228aa | ENSP00000379077.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41505 | Q4JDL3 | NM_001042392.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000509774.1 | PTPN20A-014 | 788 | 217aa | ENSP00000425362.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53531 | Q4JDL3 Q5T1G4 | NM_001042393.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000508602.1 | PTPN20A-015 | 742 | 198aa | ENSP00000424491.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q4JDL3 Q5T1G4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000509900.1 | PTPN20A-008 | 693 | 145aa | ENSP00000423819.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41508 | Q4JDL3 Q5T1G4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000502254.1 | PTPN20A-010 | 599 | 145aa | ENSP00000421404.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 Q4JDK3 Q4JDL3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000417004.1 | PTPN20A-016 | 567 | 126aa | ENSP00000396009.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5T1G4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000503851.1 | PTPN20A-018 | 545 | 136aa | ENSP00000427676.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS53530 | Q4JDK3 Q4JDL3 | NM_001042394.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000506881.1 | PTPN20A-017 | 457 | 68aa | ENSP00000422384.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RC68 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000508357.1 | PTPN20A-020 | 1213 | 62aa | ENSP00000426681.1 | Nonsense mediated decay | D6RF36 | - | - | |
| ENST00000510335.1 | PTPN20A-021 | 1153 | 104aa | ENSP00000421453.1 | Nonsense mediated decay | Q4JDL3 | - | - | |
| ENST00000374340.3 | PTPN20A-019 | 3125 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000246887.6 | PTPN20A-022 | 1995 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000509181.1 | PTPN20A-027 | 1929 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000513756.1 | PTPN20A-025 | 640 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000508715.1 | PTPN20A-026 | 586 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000513159.1 | PTPN20A-024 | 450 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000466912.1 | PTPN20A-028 | 446 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |