Description
LIM domain binding 2 [Source:HGNC Symbol;Acc:6533]
Gene Synonyms
CLIM1, LDB1
Location
Chromosome 4: 16,503,164-16,900,432 reverse strand.
GRCh37:CM000666.1
About this gene
This gene has 17 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000304523.5 | LDB2-001 | 2548 | 373aa | ENSP00000306772.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3420 | D6RAT1 O43679 Q4W5E7 | NM_001290.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000502640.1 | LDB2-004 | 2626 | 313aa | ENSP00000423963.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z2D3 D6RAT1 E9PFI4 Q4W5E7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000441778.2 | LDB2-003 | 2476 | 331aa | ENSP00000392089.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS47031 | D6RAT1 O43679 Q4W5E7 | NM_001130834.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000515064.1 | LDB2-007 | 2295 | 371aa | ENSP00000422552.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAT1 G5E9Y7 Q4W5E7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000507464.1 | LDB2-005 | 1485 | 294aa | ENSP00000425754.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000503178.2 | LDB2-201 | 1108 | 189aa | ENSP00000440940.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z2D3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000506732.1 | LDB2-010 | 567 | 164aa | ENSP00000421767.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RAT1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000508918.1 | LDB2-006 | 1498 | 110aa | ENSP00000424770.1 | Nonsense mediated decay | E7EX95 Q4W5E7 | - | - | |
| ENST00000512345.1 | LDB2-014 | 923 | 106aa | ENSP00000424676.1 | Nonsense mediated decay | E9PGU0 Q4W5E7 | - | - | |
| ENST00000503829.1 | LDB2-018 | 583 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000504886.1 | LDB2-015 | 574 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000503153.1 | LDB2-017 | 573 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000510825.1 | LDB2-013 | 562 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000513457.1 | LDB2-011 | 530 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000504189.1 | LDB2-009 | 499 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000509803.1 | LDB2-008 | 2718 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000508804.1 | LDB2-012 | 515 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
