Description
Sjogren syndrome antigen B (autoantigen La) [Source:HGNC Symbol;Acc:11316]
Gene Synonyms
LARP3, La
Location
Chromosome 2: 170,648,443-170,668,574 forward strand.
GRCh37:CM000664.1
About this gene
This gene has 12 transcripts (splice variants) and 1 paralogue.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000409333.1 | SSB-003 | 1782 | 408aa | ENSP00000386636.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2237 | E7ERC4 E9PGX9 P05455 Q2F832 Q9UMH5 Q9UMH6 Q9UMH7 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000422006.1 | SSB-004 | 2463 | 184aa | ENSP00000397029.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7ERC4 E9PGX9 Q2F832 Q9UMH7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000260956.4 | SSB-001 | 1709 | 408aa | ENSP00000260956.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS2237 | E7ERC4 E9PGX9 P05455 Q2F832 Q9UMH5 Q9UMH6 Q9UMH7 | NM_003142.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000417292.1 | SSB-005 | 545 | 120aa | ENSP00000396890.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PGX9 Q9UMH7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000413002.1 | SSB-006 | 674 | 134aa | ENSP00000395758.1 | Nonsense mediated decay | E9PFL9 Q2F832 Q9UMH7 | - | - | |
| ENST00000490914.1 | SSB-011 | 754 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000474273.1 | SSB-009 | 735 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461708.1 | SSB-007 | 619 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000470621.1 | SSB-013 | 440 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000465871.1 | SSB-010 | 421 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494051.1 | SSB-012 | 392 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000468600.1 | SSB-008 | 290 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
