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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RHOT1 ENSG00000126858

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Description

ras homolog family member T1 [Source:HGNC Symbol;Acc:21168]

Gene Synonyms

ARHT1, FLJ11040, MIRO-1, MIRO1

Location

Chromosome 17: 30,469,473-30,580,393 forward strand.

GRCh37:CM000679.1

About this gene

This gene has 17 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358365.3	RHOT1-002	3297	691aa	ENSP00000351132.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32610	Q8IXI2	NM_001033568.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583994.1	RHOT1-003	3289	523aa	ENSP00000462698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSX7	NM_001288758.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581094.1	RHOT1-006	3231	580aa	ENSP00000462669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IXI2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000333942.6	RHOT1-001	3133	618aa	ENSP00000334724.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32612	H7BXZ6 Q8IXI2	NM_018307.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394692.2	RHOT1-008	2960	650aa	ENSP00000378184.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSX7 Q8IXI2	NM_001288754.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354266.3	RHOT1-004	2919	597aa	ENSP00000346215.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BXZ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545287.2	RHOT1-015	2516	659aa	ENSP00000439737.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32611	Q8IXI2	NM_001033566.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580392.1	RHOT1-012	650	134aa	ENSP00000463532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000581148.1	RHOT1-013	628	156aa	ENSP00000467272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EP86	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000582602.1	RHOT1-018	570	190aa	ENSP00000464851.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000584852.1	RHOT1-017	421	57aa	ENSP00000461992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRG7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000581031.1	RHOT1-005	3013	625aa	ENSP00000464094.1	Nonsense mediated decay		Q8IXI2	-	-
ENST00000578205.1	RHOT1-007	2771	51aa	ENSP00000462612.1	Nonsense mediated decay		J3KSR5	-	-
ENST00000584692.1	RHOT1-014	680	40aa	ENSP00000464674.1	Nonsense mediated decay		J3QSG2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580976.1	RHOT1-010	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000582586.1	RHOT1-016	426	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000581567.1	RHOT1-011	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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