Description
cold inducible RNA binding protein [Source:HGNC Symbol;Acc:1982]
Gene Synonyms
A18HNRNP, CIRP
Location
Chromosome 19: 1,259,384-1,274,879 forward strand.
GRCh37:CM000681.1
About this gene
This gene has 46 transcripts (splice variants) and 13 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000588030.1 | CIRBP-011 | 1508 | 172aa | ENSP00000468788.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12059 | K7EJV5 K7ELV6 K7EMY9 K7EQX4 Q14011 Q53XX5 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000444172.2 | CIRBP-201 | 3025 | 244aa | ENSP00000407512.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KT17 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000589710.1 | CIRBP-005 | 1738 | 297aa | ENSP00000466897.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6W5Y5 K7EJV5 K7ELV6 K7EMY9 K7EPM4 K7EQX4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000413636.2 | CIRBP-008 | 1543 | 263aa | ENSP00000412831.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4E2X2 K7ELV6 K7EQX4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000586472.1 | CIRBP-043 | 1333 | 172aa | ENSP00000465779.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12059 | K7EJV5 K7ELV6 K7EMY9 K7EQX4 Q14011 Q53XX5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000320936.5 | CIRBP-001 | 1328 | 172aa | ENSP00000322887.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12059 | K7EJV5 K7ELV6 K7EMY9 K7EQX4 Q14011 Q53XX5 | NM_001280.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000589235.1 | CIRBP-006 | 1073 | 168aa | ENSP00000467848.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJV5 K7ELV6 K7EMY9 K7EPM4 K7EQX4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000587896.1 | CIRBP-046 | 1072 | 297aa | ENSP00000466025.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6W5Y5 K7EJV5 K7ELV6 K7EMY9 K7EPM4 K7EQX4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000587323.1 | CIRBP-032 | 1059 | 297aa | ENSP00000465077.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6W5Y5 K7EJV5 K7ELV6 K7EMY9 K7EPM4 K7EQX4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000588090.1 | CIRBP-018 | 1019 | 172aa | ENSP00000466207.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12059 | K7EJV5 K7ELV6 K7EMY9 K7EQX4 Q14011 Q53XX5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000588230.1 | CIRBP-045 | 1013 | 297aa | ENSP00000465558.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6W5Y5 K7EJV5 K7ELV6 K7EMY9 K7EPM4 K7EQX4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000588344.1 | CIRBP-036 | 870 | 70aa | ENSP00000466238.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ELV6 K7EQX4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000586773.1 | CIRBP-038 | 840 | 168aa | ENSP00000468645.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJV5 K7ELV6 K7EMY9 K7EPM4 K7EQX4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000585630.1 | CIRBP-037 | 820 | 172aa | ENSP00000466110.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12059 | K7EJV5 K7ELV6 K7EMY9 K7EQX4 Q14011 Q53XX5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000589660.1 | CIRBP-034 | 773 | 172aa | ENSP00000468224.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12059 | K7EJV5 K7ELV6 K7EMY9 K7EQX4 Q14011 Q53XX5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000591935.1 | CIRBP-020 | 746 | 168aa | ENSP00000467734.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJV5 K7ELV6 K7EMY9 K7EPM4 K7EQX4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000589686.1 | CIRBP-025 | 705 | 168aa | ENSP00000465334.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJV5 K7ELV6 K7EMY9 K7EPM4 K7EQX4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000589266.1 | CIRBP-017 | 640 | 89aa | ENSP00000467138.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ELV6 K7ENX8 K7EQX4 | - | - | |
| ENST00000588411.1 | CIRBP-015 | 619 | 105aa | ENSP00000465338.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJV5 K7ELV6 K7EQX4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000586548.1 | CIRBP-021 | 590 | 159aa | ENSP00000466712.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJV5 K7ELV6 K7EMY9 K7EQX4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000591659.1 | CIRBP-024 | 587 | 173aa | ENSP00000468097.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EJV5 K7ELV6 K7EQX4 K7ER40 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000592051.1 | CIRBP-013 | 573 | 32aa | ENSP00000468016.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7EQX4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000592815.1 | CIRBP-048 | 331 | 37aa | ENSP00000467028.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ENN6 K7EQX4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000590347.1 | CIRBP-009 | 3112 | 135aa | ENSP00000467307.1 | Nonsense mediated decay | K7ELT6 K7ELV6 K7EQX4 | - | - | |
| ENST00000587169.1 | CIRBP-004 | 3025 | 79aa | ENSP00000465114.1 | Nonsense mediated decay | K7EQL0 K7EQX4 | - | - | |
| ENST00000591097.1 | CIRBP-010 | 1507 | 60aa | ENSP00000468229.1 | Nonsense mediated decay | K7EIF7 K7EQX4 | - | - | |
| ENST00000585914.1 | CIRBP-007 | 1052 | 202aa | ENSP00000467948.1 | Nonsense mediated decay | K7EJV5 K7ELV6 K7EMY9 K7EQR7 K7EQX4 | - | - | |
| ENST00000586636.1 | CIRBP-033 | 938 | 168aa | ENSP00000464906.1 | Nonsense mediated decay | K7EJV5 K7ELV6 K7EMY9 K7EPM4 K7EQX4 | - | - | |
| ENST00000591055.1 | CIRBP-026 | 928 | 135aa | ENSP00000466216.1 | Nonsense mediated decay | K7ELT6 K7ELV6 K7EQX4 | - | - | |
| ENST00000590171.1 | CIRBP-030 | 905 | 60aa | ENSP00000464728.1 | Nonsense mediated decay | K7EIF7 K7EQX4 | - | - | |
| ENST00000585913.1 | CIRBP-035 | 856 | 168aa | ENSP00000467449.1 | Nonsense mediated decay | K7EJV5 K7ELV6 K7EMY9 K7EPM4 K7EQX4 | - | - | |
| ENST00000591376.1 | CIRBP-027 | 830 | 79aa | ENSP00000464830.1 | Nonsense mediated decay | K7EQL0 K7EQX4 | - | - | |
| ENST00000592412.1 | CIRBP-029 | 809 | 79aa | ENSP00000467876.1 | Nonsense mediated decay | K7EQL0 K7EQX4 | - | - | |
| ENST00000593048.1 | CIRBP-028 | 650 | 79aa | ENSP00000467791.1 | Nonsense mediated decay | K7EQL0 K7EQX4 | - | - | |
| ENST00000592234.1 | CIRBP-039 | 566 | 85aa | ENSP00000466131.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000590188.1 | CIRBP-041 | 199 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000593093.1 | CIRBP-002 | 3528 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000590704.1 | CIRBP-003 | 1456 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000592467.1 | CIRBP-012 | 796 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000593128.1 | CIRBP-023 | 796 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000589161.1 | CIRBP-016 | 769 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000588917.1 | CIRBP-049 | 664 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000591622.1 | CIRBP-022 | 548 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000587812.1 | CIRBP-044 | 543 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000593283.1 | CIRBP-031 | 540 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000586555.1 | CIRBP-050 | 487 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
