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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SEC11C ENSG00000166562

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Description

SEC11 homolog C (S. cerevisiae) [Source:HGNC Symbol;Acc:23400]

Gene Synonyms

SEC11L3, SPC21, SPCS4C

Location

Chromosome 18: 56,806,709-56,826,068 forward strand.

GRCh37:CM000680.1

About this gene

This gene has 8 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000587834.1	SEC11C-001	1202	192aa	ENSP00000468633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11970	B4DI03 Q9BY50	NM_033280.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000588875.1	SEC11C-006	718	161aa	ENSP00000465281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DI03 K7EJQ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000299714.3	SEC11C-007	727	99aa	ENSP00000299714.3	Nonsense mediated decay		-	-	-
ENST00000592774.1	SEC11C-002	1189	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000593132.1	SEC11C-003	586	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509791.3	SEC11C-005	1199	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000585864.1	SEC11C-004	1088	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591406.1	SEC11C-008	462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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