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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Paralogues
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ARHGEF39 ENSG00000137135

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Description

Rho guanine nucleotide exchange factor (GEF) 39 [Source:HGNC Symbol;Acc:25909]

Gene Synonyms

C9orf100, FLJ14642, RP11-331F9.7

Location

Chromosome 9: 35,658,872-35,675,863 reverse strand.

GRCh37:CM000671.1

About this gene

This gene has 8 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378387.3	ARHGEF39-001	3769	335aa	ENSP00000367638.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6584	Q8N4T4	NM_032818.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378395.2	ARHGEF39-202	3543	299aa	ENSP00000367648.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N4T4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343259.3	ARHGEF39-201	3404	186aa	ENSP00000344922.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N4T4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490638.1	ARHGEF39-004	4498	299aa	ENSP00000436756.1	Nonsense mediated decay		Q8N4T4	-	-
ENST00000475323.1	ARHGEF39-003	2862	186aa	ENSP00000436519.1	Nonsense mediated decay		Q8N4T4	-	-
ENST00000490970.1	ARHGEF39-002	1270	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468876.1	ARHGEF39-006	739	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488918.2	ARHGEF39-005	347	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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