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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CHKA ENSG00000110721

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Description

choline kinase alpha [Source:HGNC Symbol;Acc:1937]

Gene Synonyms

CHK, CK, CKI, EK

Location

Chromosome 11: 67,820,326-67,888,911 reverse strand.

GRCh37:CM000673.1

About this gene

This gene has 8 transcripts (splice variants), 4 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265689.4	CHKA-001	2530	457aa	ENSP00000265689.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8178	E9PM06 P35790	NM_001277.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356135.5	CHKA-002	1755	439aa	ENSP00000348454.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8179	P35790	NM_212469.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531341.1	CHKA-006	524	156aa	ENSP00000435032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM06	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000525155.1	CHKA-007	1201	164aa	ENSP00000432631.1	Nonsense mediated decay		H0YD02	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000533728.1	CHKA-008	662	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530730.1	CHKA-003	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528235.1	CHKA-004	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533910.1	CHKA-005	864	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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