Description
homeobox A3 [Source:HGNC Symbol;Acc:5104]
Gene Synonyms
HOX1, HOX1E
Location
Chromosome 7: 27,145,803-27,192,200 reverse strand.
GRCh37:CM000669.1
About this gene
This gene has 7 transcripts (splice variants) and 14 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000396352.4 | HOXA3-001 | 3263 | 443aa | ENSP00000379640.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5404 | A4D182 E5RIJ8 F2Z3A4 O43365 | NM_030661.4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000317201.2 | HOXA3-002 | 2574 | 443aa | ENSP00000324884.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5404 | A4D182 E5RIJ8 F2Z3A4 O43365 | NM_153631.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000522788.1 | HOXA3-005 | 581 | 84aa | ENSP00000429426.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RIJ8 F2Z3A4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000521779.1 | HOXA3-007 | 563 | 12aa | ENSP00000430111.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000522456.1 | HOXA3-004 | 503 | 54aa | ENSP00000430566.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F2Z3A4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000521401.1 | HOXA3-006 | 598 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000518451.1 | HOXA3-008 | 541 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
