Transcript: ENST00000439922.2 SPIB-201

Description

Spi-B transcription factor (Spi-1/PU.1 related) [Source:HGNC Symbol;Acc:11242]

Gene Synonyms

SPI-B

Location

Chromosome 19: 50,922,198-50,931,844 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 4733 variant alleles and maps to 252 oligo probes.

Gene

This transcript is a product of gene ENSG00000269404.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000595883.1	SPIB-001	3791	262aa	ENSP00000471921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33080	Q01892	NM_003121.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000270632.7	SPIB-003	1443	177aa	ENSP00000270632.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59412	Q01892	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596074.1	SPIB-002	847	77aa	ENSP00000470970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R037	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439922.2	SPIB-201	847	171aa	ENSP00000391877.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58674	Q01892	NM_001243998.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000597855.1	SPIB-007	564	137aa	ENSP00000469023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXA8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594685.1	SPIB-006	391	127aa	ENSP00000472626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R2J9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000599923.1	SPIB-004	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594188.1	SPIB-005	521	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 847 bps, Translation length: 171 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01892

CCDS

This transcript is a member of the Human CCDS set: CCDS58674

Version

ENST00000439922.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000439922.2 SPIB-201

Summary