Transcript: ENST00000469728.1 RTEL1-009

Description

regulator of telomere elongation helicase 1 [Source:HGNC Symbol;Acc:15888]

Gene Synonyms

C20orf41, DKCA4, DKCB5, DKFZP434C013, KIAA1088, NHL, RTEL, bK3184A7.3

Location

Chromosome 20: 62,289,647-62,292,685 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1761 variant alleles and maps to 197 oligo probes.

Gene

This transcript is a product of gene ENSG00000258366.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318100.4	RTEL1-201	5030	1400aa	ENSP00000322287.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6WH68	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370018.3	RTEL1-001	4955	1219aa	ENSP00000359035.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13531	Q9NZ71	NM_032957.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360203.5	RTEL1-011	4623	1300aa	ENSP00000353332.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63331	Q9NZ71	NM_001283009.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508582.2	RTEL1-014	4273	1243aa	ENSP00000424307.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13530	Q9NZ71	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370003.1	RTEL1-002	2273	545aa	ENSP00000359020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NZ71	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356810.4	RTEL1-012	1339	356aa	ENSP00000349265.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425905.1	RTEL1-008	664	221aa	ENSP00000388063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000496816.1	RTEL1-003	2222	316aa	ENSP00000425576.1	Nonsense mediated decay		Q9NZ71	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000488316.1	RTEL1-007	669	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469728.1	RTEL1-009	601	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463361.1	RTEL1-013	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 601 bps,

Version

ENST00000469728.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000080181 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000469728.1 RTEL1-009

Summary