Transcript: ENST00000370018.3 RTEL1-001

Description

regulator of telomere elongation helicase 1 [Source:HGNC Symbol;Acc:15888]

Gene Synonyms

C20orf41, DKCA4, DKCB5, DKFZP434C013, KIAA1088, NHL, RTEL, bK3184A7.3

Location

Chromosome 20: 62,289,163-62,327,606 forward strand.

About this transcript

This transcript has 35 exons, is annotated with 25 domains and features, is associated with 25980 variant alleles and maps to 1529 oligo probes.

Gene

This transcript is a product of gene ENSG00000258366.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318100.4	RTEL1-201	5030	1400aa	ENSP00000322287.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6WH68	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370018.3	RTEL1-001	4955	1219aa	ENSP00000359035.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13531	Q9NZ71	NM_032957.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360203.5	RTEL1-011	4623	1300aa	ENSP00000353332.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63331	Q9NZ71	NM_001283009.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508582.2	RTEL1-014	4273	1243aa	ENSP00000424307.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13530	Q9NZ71	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370003.1	RTEL1-002	2273	545aa	ENSP00000359020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NZ71	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356810.4	RTEL1-012	1339	356aa	ENSP00000349265.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425905.1	RTEL1-008	664	221aa	ENSP00000388063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000496816.1	RTEL1-003	2222	316aa	ENSP00000425576.1	Nonsense mediated decay		Q9NZ71	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000488316.1	RTEL1-007	669	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469728.1	RTEL1-009	601	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463361.1	RTEL1-013	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 35, Coding exons: 34, Transcript length: 4,955 bps, Translation length: 1,219 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NZ71

CCDS

This transcript is a member of the Human CCDS set: CCDS13531

Version

ENST00000370018.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000080173 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000370018.3 RTEL1-001

Summary