Transcript: ENST00000505170.1 LTC4S-008

Description

leukotriene C4 synthase [Source:HGNC Symbol;Acc:6719]

Gene Synonyms

MGC33147

Location

Chromosome 5: 179,220,986-179,223,445 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 1417 variant alleles and maps to 363 oligo probes.

Gene

This transcript is a product of gene ENSG00000213316.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000292596.10	LTC4S-001	666	150aa	ENSP00000292596.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34316	B2R523 Q16873	NM_145867.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401985.3	LTC4S-003	486	93aa	ENSP00000385627.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCC3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505170.1	LTC4S-008	582	69aa	ENSP00000427299.1	Nonsense mediated decay		D6RJA1	-	-
ENST00000465572.2	LTC4S-002	909	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466071.1	LTC4S-005	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509898.1	LTC4S-006	507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486713.1	LTC4S-004	496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510544.1	LTC4S-007	450	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 582 bps, Translation length: 69 residues

Version

ENST00000505170.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372347 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000505170.1 LTC4S-008

Summary