Transcript: ENST00000292596.10 LTC4S-001

Description

leukotriene C4 synthase [Source:HGNC Symbol;Acc:6719]

Gene Synonyms

MGC33147

Location

Chromosome 5: 179,220,987-179,223,513 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 1461 variant alleles and maps to 335 oligo probes.

Gene

This transcript is a product of gene ENSG00000213316.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000292596.10	LTC4S-001	666	150aa	ENSP00000292596.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34316	B2R523 Q16873	NM_145867.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401985.3	LTC4S-003	486	93aa	ENSP00000385627.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCC3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505170.1	LTC4S-008	582	69aa	ENSP00000427299.1	Nonsense mediated decay		D6RJA1	-	-
ENST00000465572.2	LTC4S-002	909	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466071.1	LTC4S-005	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509898.1	LTC4S-006	507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486713.1	LTC4S-004	496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510544.1	LTC4S-007	450	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 666 bps, Translation length: 150 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16873

CCDS

This transcript is a member of the Human CCDS set: CCDS34316

Version

ENST00000292596.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000317536 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000292596.10 LTC4S-001

Summary