Transcript: ENST00000555450.1 ATP10A-005

Description

ATPase, class V, type 10A [Source:HGNC Symbol;Acc:13542]

Gene Synonyms

ATP10C, ATPVA, ATPVC, KIAA0566

Location

About this transcript

This transcript has 2 exons, is associated with 1491 variant alleles and maps to 84 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356865.6	ATP10A-001	6680	1499aa	ENSP00000349325.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32178	O60312	NM_024490.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555756.1	ATP10A-004	418	139aa	ENSP00000451615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJI4	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000555815.1	ATP10A-002	6766	594aa	ENSP00000450480.1	Nonsense mediated decay		G3V261	-	-
ENST00000389967.4	ATP10A-003	1186	155aa	ENSP00000374617.4	Nonsense mediated decay		Q4G0S9	-	-
ENST00000553577.1	ATP10A-006	597	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555450.1	ATP10A-005	831	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 831 bps,

Version

ENST00000555450.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000414832 (version 1)