Transcript: ENST00000435101.1 CYP2D7P-004

Description

cytochrome P450, family 2, subfamily D, polypeptide 7, pseudogene [Source:HGNC Symbol;Acc:2624]

Gene Synonyms

CYP2D, CYP2D7, CYP2D7P1, CYP2D@

Location

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 1272 variant alleles and maps to 507 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq	Flags
ENST00000435101.1	CYP2D7P-004	692	45aa	ENSP00000437680.2	Nonsense mediated decay	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000433992.1	CYP2D7P-003	1738	517aa	ENSP00000439604.1	Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358097.4	CYP2D7P-002	1655	498aa	ENSP00000445124.1	Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424775.1	CYP2D7P-006	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENST00000435688.1	CYP2D7P-005	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 692 bps, Translation length: 45 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000435101.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000320538 (version 3)