Transcript: ENST00000358097.4 CYP2D7P-002

Description

cytochrome P450, family 2, subfamily D, polypeptide 7, pseudogene [Source:HGNC Symbol;Acc:2624]

Gene Synonyms

CYP2D, CYP2D7, CYP2D7P1, CYP2D@

Location

About this transcript

This transcript has 9 exons, is associated with 3492 variant alleles and maps to 594 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq	Flags
ENST00000435101.1	CYP2D7P-004	692	45aa	ENSP00000437680.2	Nonsense mediated decay	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000433992.1	CYP2D7P-003	1738	517aa	ENSP00000439604.1	Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000358097.4	CYP2D7P-002	1655	498aa	ENSP00000445124.1	Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000424775.1	CYP2D7P-006	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENST00000435688.1	CYP2D7P-005	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,655 bps, Translation length: 498 residues

Version

ENST00000358097.4

Type

Polymorphic pseudogene

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000075076 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.