Transcript: ENST00000514170.1 CNGA1-006

Description

cyclic nucleotide gated channel alpha 1 [Source:HGNC Symbol;Acc:2148]

Gene Synonyms

CNCG, CNCG1, CNG-1, CNG1, RCNC1, RCNCa, RCNCalpha, RP49

Location

Chromosome 4: 47,937,994-48,018,609 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features, is associated with 32894 variant alleles and maps to 490 oligo probes.

Gene

This transcript is a product of gene ENSG00000198515.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000402813.3	CNGA1-001	2867	759aa	ENSP00000384264.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47050	D6R978 D6RCF1 P29973	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544810.1	CNGA1-202	2863	690aa	ENSP00000443401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43226	D6R978 D6RCF1 P29973	NM_001142564.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514170.1	CNGA1-006	2837	690aa	ENSP00000426862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43226	D6R978 D6RCF1 P29973	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420489.2	CNGA1-007	2746	690aa	ENSP00000389881.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43226	D6R978 D6RCF1 P29973	NM_000087.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358519.4	CNGA1-201	2627	690aa	ENSP00000351320.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43226	D6R978 D6RCF1 P29973	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513178.1	CNGA1-005	589	99aa	ENSP00000423327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R978	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504722.1	CNGA1-008	543	128aa	ENSP00000423721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R978 D6RCF1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514520.1	CNGA1-009	405	99aa	ENSP00000421110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R978	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506118.1	CNGA1-004	701	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 8, Transcript length: 2,837 bps, Translation length: 690 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P29973

CCDS

This transcript is a member of the Human CCDS set: CCDS43226

Version

ENST00000514170.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372070 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000514170.1 CNGA1-006

Summary