Transcript: ENST00000504722.1 CNGA1-008

Description

cyclic nucleotide gated channel alpha 1 [Source:HGNC Symbol;Acc:2148]

Gene Synonyms

CNCG, CNCG1, CNG-1, CNG1, RCNC1, RCNCa, RCNCalpha, RP49

Location

Chromosome 4: 47,945,262-48,014,961 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 28026 variant alleles and maps to 192 oligo probes.

Gene

This transcript is a product of gene ENSG00000198515.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000402813.3	CNGA1-001	2867	759aa	ENSP00000384264.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47050	D6R978 D6RCF1 P29973	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544810.1	CNGA1-202	2863	690aa	ENSP00000443401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43226	D6R978 D6RCF1 P29973	NM_001142564.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514170.1	CNGA1-006	2837	690aa	ENSP00000426862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43226	D6R978 D6RCF1 P29973	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420489.2	CNGA1-007	2746	690aa	ENSP00000389881.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43226	D6R978 D6RCF1 P29973	NM_000087.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358519.4	CNGA1-201	2627	690aa	ENSP00000351320.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43226	D6R978 D6RCF1 P29973	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513178.1	CNGA1-005	589	99aa	ENSP00000423327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R978	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504722.1	CNGA1-008	543	128aa	ENSP00000423721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R978 D6RCF1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514520.1	CNGA1-009	405	99aa	ENSP00000421110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R978	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506118.1	CNGA1-004	701	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 543 bps, Translation length: 128 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000504722.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000372085 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000504722.1 CNGA1-008

Summary