Transcript: ENST00000354725.3 SND1-001

Description

staphylococcal nuclease and tudor domain containing 1 [Source:HGNC Symbol;Acc:30646]

Gene Synonyms

TDRD11, p100

Location

Chromosome 7: 127,292,234-127,732,659 forward strand.

About this transcript

This transcript has 24 exons, is annotated with 37 domains and features, is associated with 174669 variant alleles and maps to 835 oligo probes.

Gene

This transcript is a product of gene ENSG00000197157.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354725.3	SND1-001	3476	910aa	ENSP00000346762.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34747	B2R5U1 Q7KZF4	NM_014390.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486037.1	SND1-016	695	231aa	ENSP00000419327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C597	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000467238.1	SND1-008	716	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465900.1	SND1-007	630	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483503.1	SND1-004	603	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485871.1	SND1-012	597	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470723.1	SND1-009	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461056.1	SND1-002	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468166.1	SND1-006	552	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492772.1	SND1-005	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470463.1	SND1-010	530	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468621.1	SND1-003	494	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492840.1	SND1-015	472	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484767.1	SND1-014	460	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489417.1	SND1-011	1447	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463020.1	SND1-013	793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 3,476 bps, Translation length: 910 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7KZF4

CCDS

This transcript is a member of the Human CCDS set: CCDS34747

Version

ENST00000354725.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000349148 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000354725.3 SND1-001

Summary