Transcript: ENST00000528239.1 SLC22A25-002

Description

solute carrier family 22, member 25 [Source:HGNC Symbol;Acc:32935]

Gene Synonyms

HIMTP, LOC387601, MGC120420, UST6

Location

About this transcript

This transcript has 11 exons, is annotated with 3 domains and features, is associated with 31567 variant alleles and maps to 469 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000403374.2	SLC22A25-201	2327	234aa	ENSP00000384208.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BYX8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000306494.6	SLC22A25-001	1692	547aa	ENSP00000307443.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31592	Q6T423	NM_199352.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528239.1	SLC22A25-002	3699	202aa	ENSP00000431235.1	Nonsense mediated decay		A4IF28	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000527057.1	SLC22A25-005	1788	399aa	ENSP00000432242.1	Nonsense mediated decay		A4IF29	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000525295.1	SLC22A25-004	1362	156aa	ENSP00000435614.1	Nonsense mediated decay		E9PJ86 Q494Y1	-	-

Summary

Statistics

Exons: 11, Coding exons: 3, Transcript length: 3,699 bps, Translation length: 202 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000528239.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000383525 (version 1)