Transcript: ENST00000569953.1 CACNA1H-008

Description

calcium channel, voltage-dependent, T type, alpha 1H subunit [Source:HGNC Symbol;Acc:1395]

Gene Synonyms

CACNA1HB, Cav3.2, ECA6, EIG6

Location

Chromosome 16: 1,259,356-1,261,448 forward strand.

About this transcript

This transcript has 6 exons, is associated with 1936 variant alleles and maps to 185 oligo probes.

Gene

This transcript is a product of gene ENSG00000196557.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000348261.5	CACNA1H-001	8084	2353aa	ENSP00000334198.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45375	O95180 Q9NYY6 Q9NYY7	NM_021098.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358590.4	CACNA1H-201	8069	2347aa	ENSP00000351401.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45376	O95180 Q9NYY6 Q9NYY7	NM_001005407.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565831.1	CACNA1H-002	7134	2347aa	ENSP00000455840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45376	O95180 Q9NYY6 Q9NYY7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564927.1	CACNA1H-006	3464	897aa	ENSP00000455512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569107.1	CACNA1H-004	3391	1100aa	ENSP00000454990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000564231.1	CACNA1H-003	3343	1084aa	ENSP00000457555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000562079.1	CACNA1H-005	3325	1078aa	ENSP00000454581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569953.1	CACNA1H-008	867	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564954.1	CACNA1H-007	607	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 867 bps,

Version

ENST00000569953.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000421604 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000569953.1 CACNA1H-008

Summary