Transcript: ENST00000564927.1 CACNA1H-006

Description

calcium channel, voltage-dependent, T type, alpha 1H subunit [Source:HGNC Symbol;Acc:1395]

Gene Synonyms

CACNA1HB, Cav3.2, ECA6, EIG6

Location

Chromosome 16: 1,261,482-1,271,765 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 22 domains and features, is associated with 8787 variant alleles and maps to 433 oligo probes.

Gene

This transcript is a product of gene ENSG00000196557.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000348261.5	CACNA1H-001	8084	2353aa	ENSP00000334198.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45375	O95180 Q9NYY6 Q9NYY7	NM_021098.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358590.4	CACNA1H-201	8069	2347aa	ENSP00000351401.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45376	O95180 Q9NYY6 Q9NYY7	NM_001005407.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565831.1	CACNA1H-002	7134	2347aa	ENSP00000455840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45376	O95180 Q9NYY6 Q9NYY7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564927.1	CACNA1H-006	3464	897aa	ENSP00000455512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569107.1	CACNA1H-004	3391	1100aa	ENSP00000454990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000564231.1	CACNA1H-003	3343	1084aa	ENSP00000457555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000562079.1	CACNA1H-005	3325	1078aa	ENSP00000454581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569953.1	CACNA1H-008	867	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564954.1	CACNA1H-007	607	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,464 bps, Translation length: 897 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000564927.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000421608 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000564927.1 CACNA1H-006

Summary