Transcript: ENST00000487222.1 EPHB4-002

Description

EPH receptor B4 [Source:HGNC Symbol;Acc:3395]

Gene Synonyms

HTK, MYK1, TYRO11, Tyro11

Location

Chromosome 7: 100,400,190-100,423,148 reverse strand.

About this transcript

This transcript has 16 exons, is associated with 12347 variant alleles and maps to 607 oligo probes.

Gene

This transcript is a product of gene ENSG00000196411.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358173.3	EPHB4-001	4329	987aa	ENSP00000350896.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5706	P54760 Q541P7	NM_004444.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360620.3	EPHB4-005	3789	935aa	ENSP00000353833.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96L35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477446.1	EPHB4-004	1551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489808.1	EPHB4-003	921	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487222.1	EPHB4-002	5058	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478459.1	EPHB4-007	965	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492403.1	EPHB4-009	812	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492878.1	EPHB4-006	769	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467515.1	EPHB4-008	709	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 0, Transcript length: 5,058 bps,

Version

ENST00000487222.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000347223 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000487222.1 EPHB4-002

Summary