Transcript: ENST00000358173.3 EPHB4-001

Description

EPH receptor B4 [Source:HGNC Symbol;Acc:3395]

Gene Synonyms

HTK, MYK1, TYRO11, Tyro11

Location

Chromosome 7: 100,400,187-100,425,121 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 46 domains and features, is associated with 13591 variant alleles and maps to 662 oligo probes.

Gene

This transcript is a product of gene ENSG00000196411.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358173.3	EPHB4-001	4329	987aa	ENSP00000350896.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5706	P54760 Q541P7	NM_004444.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360620.3	EPHB4-005	3789	935aa	ENSP00000353833.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96L35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477446.1	EPHB4-004	1551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489808.1	EPHB4-003	921	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487222.1	EPHB4-002	5058	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478459.1	EPHB4-007	965	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492403.1	EPHB4-009	812	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492878.1	EPHB4-006	769	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467515.1	EPHB4-008	709	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 4,329 bps, Translation length: 987 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P54760

CCDS

This transcript is a member of the Human CCDS set: CCDS5706

Version

ENST00000358173.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000347222 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000358173.3 EPHB4-001

Summary