Transcript: ENST00000336128.7 ZNF548-002

Description

zinc finger protein 548 [Source:HGNC Symbol;Acc:26561]

Gene Synonyms

FLJ32932

Location

Chromosome 19: 57,901,265-57,911,531 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 66 domains and features, is associated with 4861 variant alleles and maps to 203 oligo probes.

Gene

This transcript is a product of gene ENSG00000188785.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366197.5	ZNF548-001	3381	533aa	ENSP00000379482.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46209	Q8NEK5	NM_152909.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336128.7	ZNF548-002	2115	545aa	ENSP00000337555.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54324	M0QX17 M0R041 M0R354 Q8NEK5	NM_001172773.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000600927.1	ZNF548-012	616	114aa	ENSP00000470982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QX17 M0R041 M0R354	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000597400.1	ZNF548-011	589	63aa	ENSP00000473179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R354 M0R3F2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000598895.1	ZNF548-010	571	87aa	ENSP00000469101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXE2 M0R354	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596282.1	ZNF548-007	569	57aa	ENSP00000468847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QX17 M0R354	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000594668.1	ZNF548-008	563	75aa	ENSP00000469598.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QY53 M0R354	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000594693.1	ZNF548-006	552	44aa	ENSP00000473004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R354	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000597047.1	ZNF548-004	682	63aa	ENSP00000471923.1	Nonsense mediated decay		M0R1K1	-	-
ENST00000602086.1	ZNF548-003	567	47aa	ENSP00000472618.1	Nonsense mediated decay		M0R2J6	-	-
ENST00000600442.1	ZNF548-005	535	56aa	ENSP00000469700.1	Nonsense mediated decay		M0QYA3	-	-
ENST00000597576.1	ZNF548-009	659	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,115 bps, Translation length: 545 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NEK5

CCDS

This transcript is a member of the Human CCDS set: CCDS54324

Version

ENST00000336128.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000465939 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000336128.7 ZNF548-002

Summary