Transcript: ENST00000597400.1 ZNF548-011

Description

zinc finger protein 548 [Source:HGNC Symbol;Acc:26561]

Gene Synonyms

FLJ32932

Location

Chromosome 19: 57,901,243-57,909,966 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 3961 variant alleles and maps to 111 oligo probes.

Gene

This transcript is a product of gene ENSG00000188785.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366197.5	ZNF548-001	3381	533aa	ENSP00000379482.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46209	Q8NEK5	NM_152909.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336128.7	ZNF548-002	2115	545aa	ENSP00000337555.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54324	M0QX17 M0R041 M0R354 Q8NEK5	NM_001172773.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000600927.1	ZNF548-012	616	114aa	ENSP00000470982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QX17 M0R041 M0R354	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000597400.1	ZNF548-011	589	63aa	ENSP00000473179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R354 M0R3F2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000598895.1	ZNF548-010	571	87aa	ENSP00000469101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXE2 M0R354	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596282.1	ZNF548-007	569	57aa	ENSP00000468847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QX17 M0R354	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000594668.1	ZNF548-008	563	75aa	ENSP00000469598.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QY53 M0R354	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000594693.1	ZNF548-006	552	44aa	ENSP00000473004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R354	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000597047.1	ZNF548-004	682	63aa	ENSP00000471923.1	Nonsense mediated decay		M0R1K1	-	-
ENST00000602086.1	ZNF548-003	567	47aa	ENSP00000472618.1	Nonsense mediated decay		M0R2J6	-	-
ENST00000600442.1	ZNF548-005	535	56aa	ENSP00000469700.1	Nonsense mediated decay		M0QYA3	-	-
ENST00000597576.1	ZNF548-009	659	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 589 bps, Translation length: 63 residues

Version

ENST00000597400.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000465946 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000597400.1 ZNF548-011

Summary