Transcript: ENST00000338302.3 PEAR1-001

Description

platelet endothelial aggregation receptor 1 [Source:HGNC Symbol;Acc:33631]

Gene Synonyms

FLJ00193, JEDI, MEGF12

Location

Chromosome 1: 156,863,512-156,886,221 forward strand.

About this transcript

This transcript has 24 exons, is annotated with 91 domains and features, is associated with 11821 variant alleles and maps to 662 oligo probes.

Gene

This transcript is a product of gene ENSG00000187800.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338302.3	PEAR1-001	4970	1037aa	ENSP00000344465.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30892	A6PVP2 Q5VY43	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000292357.7	PEAR1-201	4866	1037aa	ENSP00000292357.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30892	A6PVP2 Q5VY43	NM_001080471.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455314.1	PEAR1-007	642	173aa	ENSP00000389742.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVP2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444016.1	PEAR1-005	688	77aa	ENSP00000397870.1	Nonsense mediated decay		F2Z2F7	-	-
ENST00000469390.1	PEAR1-002	4470	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465101.1	PEAR1-004	980	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482505.1	PEAR1-003	492	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 22, Transcript length: 4,970 bps, Translation length: 1,037 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5VY43

CCDS

This transcript is a member of the Human CCDS set: CCDS30892

Version

ENST00000338302.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000098937 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000338302.3 PEAR1-001

Summary