Transcript: ENST00000469390.1 PEAR1-002

Description

platelet endothelial aggregation receptor 1 [Source:HGNC Symbol;Acc:33631]

Gene Synonyms

FLJ00193, JEDI, MEGF12

Location

Chromosome 1: 156,876,109-156,886,218 forward strand.

About this transcript

This transcript has 18 exons, is associated with 6217 variant alleles and maps to 530 oligo probes.

Gene

This transcript is a product of gene ENSG00000187800.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338302.3	PEAR1-001	4970	1037aa	ENSP00000344465.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30892	A6PVP2 Q5VY43	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000292357.7	PEAR1-201	4866	1037aa	ENSP00000292357.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30892	A6PVP2 Q5VY43	NM_001080471.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455314.1	PEAR1-007	642	173aa	ENSP00000389742.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVP2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444016.1	PEAR1-005	688	77aa	ENSP00000397870.1	Nonsense mediated decay		F2Z2F7	-	-
ENST00000469390.1	PEAR1-002	4470	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465101.1	PEAR1-004	980	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482505.1	PEAR1-003	492	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 0, Transcript length: 4,470 bps,

Version

ENST00000469390.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000098938 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000469390.1 PEAR1-002

Summary