Transcript: ENST00000410025.1 FAM183A-002

Description

family with sequence similarity 183, member A [Source:HGNC Symbol;Acc:34347]

Gene Synonyms

LOC440585, hCG23177

Location

Chromosome 1: 43,613,588-43,622,067 forward strand.

About this transcript

This transcript has 4 exons, is associated with 3715 variant alleles and maps to 160 oligo probes.

Gene

This transcript is a product of gene ENSG00000186973.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335282.4	FAM183A-001	488	134aa	ENSP00000334415.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44126	A6NL82	NM_001101376.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410048.1	FAM183A-003	500	106aa	ENSP00000387249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBL6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409396.1	FAM183A-005	448	139aa	ENSP00000387254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBL7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000410025.1	FAM183A-002	530	58aa	ENSP00000387018.2	Nonsense mediated decay		B7ZBL9	-	-
ENST00000409337.1	FAM183A-006	476	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481753.1	FAM183A-004	365	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 530 bps, Translation length: 58 residues

Version

ENST00000410025.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000019025 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000410025.1 FAM183A-002

Summary