Transcript: ENST00000335282.4 FAM183A-001

Description

family with sequence similarity 183, member A [Source:HGNC Symbol;Acc:34347]

Gene Synonyms

LOC440585, hCG23177

Location

Chromosome 1: 43,613,623-43,622,067 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 3689 variant alleles and maps to 182 oligo probes.

Gene

This transcript is a product of gene ENSG00000186973.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335282.4	FAM183A-001	488	134aa	ENSP00000334415.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44126	A6NL82	NM_001101376.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410048.1	FAM183A-003	500	106aa	ENSP00000387249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBL6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409396.1	FAM183A-005	448	139aa	ENSP00000387254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZBL7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000410025.1	FAM183A-002	530	58aa	ENSP00000387018.2	Nonsense mediated decay		B7ZBL9	-	-
ENST00000409337.1	FAM183A-006	476	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481753.1	FAM183A-004	365	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 488 bps, Translation length: 134 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A6NL82

CCDS

This transcript is a member of the Human CCDS set: CCDS44126

Version

ENST00000335282.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000019024 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000335282.4 FAM183A-001

Summary