Transcript: ENST00000591680.1 GPATCH8-001

Description

G patch domain containing 8 [Source:HGNC Symbol;Acc:29066]

Gene Synonyms

GPATC8, KIAA0553

Location

Chromosome 17: 42,474,784-42,580,769 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 28 domains and features, is associated with 46799 variant alleles and maps to 401 oligo probes.

Gene

This transcript is a product of gene ENSG00000186566.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000434000.1	GPATCH8-201	4710	1424aa	ENSP00000395016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UKJ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591680.1	GPATCH8-001	4692	1502aa	ENSP00000467556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32666	Q9UKJ3	NM_001002909.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000585614.1	GPATCH8-010	686	221aa	ENSP00000465781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EKU0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592154.1	GPATCH8-004	650	46aa	ENSP00000467873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQK8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000588554.1	GPATCH8-005	565	42aa	ENSP00000465921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EL52	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587228.1	GPATCH8-002	4713	43aa	ENSP00000468719.1	Nonsense mediated decay		Q9UKJ3	-	-
ENST00000590041.1	GPATCH8-006	829	46aa	ENSP00000467233.1	Nonsense mediated decay		K7EQK8	-	-
ENST00000592746.1	GPATCH8-008	457	46aa	ENSP00000464815.1	Nonsense mediated decay		K7EQK8	-	-
ENST00000586037.1	GPATCH8-009	345	46aa	ENSP00000468821.1	Nonsense mediated decay		K7EQK8	-	-
ENST00000586265.1	GPATCH8-007	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000335500.4	GPATCH8-003	8109	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 4,692 bps, Translation length: 1,502 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UKJ3

CCDS

This transcript is a member of the Human CCDS set: CCDS32666

Version

ENST00000591680.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000457797 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000591680.1 GPATCH8-001

Summary