Transcript: ENST00000559187.1 RPS17-005

Description

ribosomal protein S17 [Source:HGNC Symbol;Acc:10397]

Gene Synonyms

DBA4, MGC72007, RPS17L, RPS17L1, RPS17L2, S17

Location

Chromosome 15: 82,821,163-82,824,867 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 1739 variant alleles and maps to 635 oligo probes.

Gene

This transcript is a product of gene ENSG00000184779.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000559187.1	RPS17-005	1909	136aa	ENSP00000453564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YN88	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330339.7	RPS17-001	595	135aa	ENSP00000346045.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10320	P08708	NM_001021.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560826.1	RPS17-007	581	191aa	ENSP00000452655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK46	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560977.1	RPS17-008	522	59aa	ENSP00000452696.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000560084.1	RPS17-004	1922	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559636.1	RPS17-003	1877	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560652.1	RPS17-009	932	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559854.1	RPS17-010	760	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560151.1	RPS17-002	759	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560024.1	RPS17-006	557	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,909 bps, Translation length: 136 residues

Version

ENST00000559187.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000419416 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000559187.1 RPS17-005

Summary