Transcript: ENST00000570641.1 SPNS2-008

Description

spinster homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:26992]

Location

Chromosome 17: 4,437,680-4,440,112 forward strand.

About this transcript

This transcript has 2 exons, is associated with 2325 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene ENSG00000183018.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000329078.3	SPNS2-001	3447	549aa	ENSP00000333292.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42237	Q8IVW8	NM_001124758.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000571386.1	SPNS2-003	846	282aa	ENSP00000461410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4N9	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000570979.1	SPNS2-002	1768	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576635.2	SPNS2-004	901	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573106.1	SPNS2-006	828	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570641.1	SPNS2-008	783	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573990.1	SPNS2-007	761	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000571668.1	SPNS2-005	704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 783 bps,

Version

ENST00000570641.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000439108 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000570641.1 SPNS2-008

Summary