Transcript: ENST00000329235.2 AP1S2-001

Description

adaptor-related protein complex 1, sigma 2 subunit [Source:HGNC Symbol;Acc:560]

Gene Synonyms

MGC:1902, MRX59, MRXS21, MRXSF, SIGMA1B

Location

Chromosome X: 15,843,929-15,873,054 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 7913 variant alleles and maps to 468 oligo probes.

Gene

This transcript is a product of gene ENSG00000182287.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380291.1	AP1S2-003	3492	160aa	ENSP00000369645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NH01	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000329235.2	AP1S2-001	2237	157aa	ENSP00000328789.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14173	P56377 Q549M9	NM_003916.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421527.2	AP1S2-201	1496	202aa	ENSP00000414714.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NH01 B4DSU4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452376.1	AP1S2-002	991	153aa	ENSP00000403498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000545766.1	AP1S2-202	919	195aa	ENSP00000444957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z3M9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450644.1	AP1S2-004	530	146aa	ENSP00000389474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000479184.1	AP1S2-005	682	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,237 bps, Translation length: 157 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P56377

CCDS

This transcript is a member of the Human CCDS set: CCDS14173

Version

ENST00000329235.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055893 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000329235.2 AP1S2-001

Summary