Transcript: ENST00000479184.1 AP1S2-005

Description

adaptor-related protein complex 1, sigma 2 subunit [Source:HGNC Symbol;Acc:560]

Gene Synonyms

MGC:1902, MRX59, MRXS21, MRXSF, SIGMA1B

Location

Chromosome X: 15,849,229-15,863,639 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 3866 variant alleles and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSG00000182287.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000329235.2	AP1S2-001	2237	157aa	ENSP00000328789.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14173	P56377 Q549M9	NM_003916.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380291.1	AP1S2-003	3492	160aa	ENSP00000369645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NH01	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421527.2	AP1S2-201	1496	202aa	ENSP00000414714.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NH01 B4DSU4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452376.1	AP1S2-002	991	153aa	ENSP00000403498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000545766.1	AP1S2-202	919	195aa	ENSP00000444957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z3M9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450644.1	AP1S2-004	530	146aa	ENSP00000389474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000479184.1	AP1S2-005	682	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 682 bps,

Version

ENST00000479184.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000055897 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000479184.1 AP1S2-005

Summary