Transcript: ENST00000479391.2 ERCC6L2-005

Description

excision repair cross-complementing rodent repair deficiency, complementation group 6-like 2 [Source:HGNC Symbol;Acc:26922]

Gene Synonyms

C9orf102, FLJ37706, RAD26L, SR278

Location

Chromosome 9: 98,684,684-98,767,137 forward strand.

About this transcript

This transcript has 13 exons, is associated with 33738 variant alleles and maps to 516 oligo probes.

Gene

This transcript is a product of gene ENSG00000182150.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000288985.7	ERCC6L2-001	4564	712aa	ENSP00000288985.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35072	Q5T890	NM_001010895.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437817.1	ERCC6L2-202	3691	523aa	ENSP00000416286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T890	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000320486.5	ERCC6L2-006	2925	522aa	ENSP00000320939.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000407474.3	ERCC6L2-201	2109	531aa	ENSP00000384365.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A4D997	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402838.2	ERCC6L2-007	546	182aa	ENSP00000384215.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000426805.1	ERCC6L2-004	498	82aa	ENSP00000395345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000479391.2	ERCC6L2-005	2849	54aa	ENSP00000473877.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000456993.1	ERCC6L2-002	1822	365aa	ENSP00000409751.1	Nonsense mediated decay		F2Z2R4	-	-
ENST00000466840.1	ERCC6L2-003	3586	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470362.1	ERCC6L2-008	468	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 3, Transcript length: 2,849 bps, Translation length: 54 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000479391.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000053251 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000479391.2 ERCC6L2-005

Summary