Transcript: ENST00000288985.7 ERCC6L2-001

Description

excision repair cross-complementing rodent repair deficiency, complementation group 6-like 2 [Source:HGNC Symbol;Acc:26922]

Gene Synonyms

C9orf102, FLJ37706, RAD26L, SR278

Location

Chromosome 9: 98,637,983-98,731,122 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 14 domains and features, is associated with 39037 variant alleles and maps to 622 oligo probes.

Gene

This transcript is a product of gene ENSG00000182150.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000288985.7	ERCC6L2-001	4564	712aa	ENSP00000288985.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35072	Q5T890	NM_001010895.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437817.1	ERCC6L2-202	3691	523aa	ENSP00000416286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T890	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000320486.5	ERCC6L2-006	2925	522aa	ENSP00000320939.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000407474.3	ERCC6L2-201	2109	531aa	ENSP00000384365.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A4D997	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402838.2	ERCC6L2-007	546	182aa	ENSP00000384215.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000426805.1	ERCC6L2-004	498	82aa	ENSP00000395345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000479391.2	ERCC6L2-005	2849	54aa	ENSP00000473877.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000456993.1	ERCC6L2-002	1822	365aa	ENSP00000409751.1	Nonsense mediated decay		F2Z2R4	-	-
ENST00000466840.1	ERCC6L2-003	3586	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470362.1	ERCC6L2-008	468	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 4,564 bps, Translation length: 712 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5T890

CCDS

This transcript is a member of the Human CCDS set: CCDS35072

Version

ENST00000288985.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000053247 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000288985.7 ERCC6L2-001

Summary