Transcript: ENST00000584217.1 TSHZ1-004

Description

teashirt zinc finger homeobox 1 [Source:HGNC Symbol;Acc:10669]

Gene Synonyms

CAA, NY-CO-33, SDCCAG33, TSH1

Location

About this transcript

This transcript has 1 exon, is associated with 4007 variant alleles and maps to 288 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322038.5	TSHZ1-001	4992	1032aa	ENSP00000323584.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12009	A7YF73 H0YKA1 H0YN23 Q6ZSZ6	NM_005786.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580243.1	TSHZ1-005	3582	1077aa	ENSP00000464391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A7YF73 H0YKA1 H0YN23 Q6ZSZ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560918.2	TSHZ1-002	1022	276aa	ENSP00000453834.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKA1 H0YN23	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000560661.1	TSHZ1-003	551	78aa	ENSP00000452718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKA1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000584217.1	TSHZ1-004	7080	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 7,080 bps,

Version

ENST00000584217.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000444914 (version 1)