Transcript: ENST00000484115.1 P4HTM-004

Description

prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) [Source:HGNC Symbol;Acc:28858]

Gene Synonyms

EGLN4, FLJ20262, HIFPH4, P4H-TM, PH-4, PH4, PHD4

Location

Chromosome 3: 49,027,371-49,044,548 forward strand.

About this transcript

This transcript has 4 exons, is associated with 7102 variant alleles and maps to 674 oligo probes.

Gene

This transcript is a product of gene ENSG00000178467.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000343546.4	P4HTM-002	2268	563aa	ENSP00000341422.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2781	Q9NXG6	NM_177938.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000383729.4	P4HTM-001	2127	502aa	ENSP00000373235.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43089	Q9NXG6	NM_177939.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491739.1	P4HTM-007	681	157aa	ENSP00000476303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000444213.1	P4HTM-009	678	226aa	ENSP00000398554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000475629.1	P4HTM-005	651	139aa	ENSP00000477191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000472796.2	P4HTM-012	598	88aa	ENSP00000476858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000609406.1	P4HTM-013	1968	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468374.1	P4HTM-010	696	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486817.1	P4HTM-011	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484115.1	P4HTM-004	5285	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472301.1	P4HTM-003	2796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485210.1	P4HTM-008	1033	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 5,285 bps,

Version

ENST00000484115.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000157214 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000484115.1 P4HTM-004

Summary