Transcript: ENST00000383729.4 P4HTM-001

Description

prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) [Source:HGNC Symbol;Acc:28858]

Gene Synonyms

EGLN4, FLJ20262, HIFPH4, P4H-TM, PH-4, PH4, PHD4

Location

Chromosome 3: 49,027,319-49,044,587 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 11 domains and features, is associated with 7161 variant alleles and maps to 498 oligo probes.

Gene

This transcript is a product of gene ENSG00000178467.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000343546.4	P4HTM-002	2268	563aa	ENSP00000341422.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2781	Q9NXG6	NM_177938.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000383729.4	P4HTM-001	2127	502aa	ENSP00000373235.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43089	Q9NXG6	NM_177939.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491739.1	P4HTM-007	681	157aa	ENSP00000476303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000444213.1	P4HTM-009	678	226aa	ENSP00000398554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000475629.1	P4HTM-005	651	139aa	ENSP00000477191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000472796.2	P4HTM-012	598	88aa	ENSP00000476858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000609406.1	P4HTM-013	1968	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468374.1	P4HTM-010	696	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486817.1	P4HTM-011	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484115.1	P4HTM-004	5285	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472301.1	P4HTM-003	2796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485210.1	P4HTM-008	1033	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,127 bps, Translation length: 502 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NXG6

CCDS

This transcript is a member of the Human CCDS set: CCDS43089

Version

ENST00000383729.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000157211 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000383729.4 P4HTM-001

Summary