Transcript: ENST00000472125.1 RUVBL1-003

Description

RuvB-like AAA ATPase 1 [Source:HGNC Symbol;Acc:10474]

Gene Synonyms

ECP54, INO80H, NMP238, PONTIN, Pontin52, RVB1, TIH1, TIP49, TIP49A, TIP49a

Location

Chromosome 3: 127,783,625-127,820,462 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 15234 variant alleles and maps to 179 oligo probes.

Gene

This transcript is a product of gene ENSG00000175792.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000464873.1	RUVBL1-002	2126	315aa	ENSP00000420738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ETR0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000322623.5	RUVBL1-001	1761	456aa	ENSP00000318297.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3047	J3QLR1 Q9Y265	NM_003707.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417360.1	RUVBL1-201	1641	386aa	ENSP00000393755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y265	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472125.1	RUVBL1-003	913	222aa	ENSP00000417370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000478892.1	RUVBL1-004	872	267aa	ENSP00000417254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4G5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000585057.1	RUVBL1-008	1113	131aa	ENSP00000463669.1	Nonsense mediated decay		J3QLR1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480616.1	RUVBL1-006	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478243.1	RUVBL1-005	395	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000582176.1	RUVBL1-009	4062	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 913 bps, Translation length: 222 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000472125.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000356730 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000472125.1 RUVBL1-003

Summary