Transcript: ENST00000322623.5 RUVBL1-001

Description

RuvB-like AAA ATPase 1 [Source:HGNC Symbol;Acc:10474]

Gene Synonyms

ECP54, INO80H, NMP238, PONTIN, Pontin52, RVB1, TIH1, TIP49, TIP49A, TIP49a

Location

Chromosome 3: 127,799,803-127,842,667 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 8 domains and features, is associated with 16905 variant alleles and maps to 444 oligo probes.

Gene

This transcript is a product of gene ENSG00000175792.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000464873.1	RUVBL1-002	2126	315aa	ENSP00000420738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ETR0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000322623.5	RUVBL1-001	1761	456aa	ENSP00000318297.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3047	J3QLR1 Q9Y265	NM_003707.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417360.1	RUVBL1-201	1641	386aa	ENSP00000393755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y265	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472125.1	RUVBL1-003	913	222aa	ENSP00000417370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000478892.1	RUVBL1-004	872	267aa	ENSP00000417254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4G5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000585057.1	RUVBL1-008	1113	131aa	ENSP00000463669.1	Nonsense mediated decay		J3QLR1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480616.1	RUVBL1-006	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478243.1	RUVBL1-005	395	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000582176.1	RUVBL1-009	4062	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,761 bps, Translation length: 456 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y265

CCDS

This transcript is a member of the Human CCDS set: CCDS3047

Version

ENST00000322623.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000356728 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000322623.5 RUVBL1-001

Summary